Interface HaploidReferenceDecoder
- All Superinterfaces:
AutoCloseable, Closeable, HtsDecoder<SAMSequenceDictionary, ReferenceSequence>, HtsQuery<ReferenceSequence>, Iterable<ReferenceSequence>
- All Known Implementing Classes:
FASTADecoderV1_0
public interface HaploidReferenceDecoder
extends HtsDecoder<SAMSequenceDictionary, ReferenceSequence>
Base class for all
HtsContentType.HAPLOID_REFERENCE decoders.-
Method Summary
Methods inherited from interface HtsDecoder
close, getDisplayName, getFileFormat, getHeader, getVersionMethods inherited from interface HtsQuery
hasIndex, isQueryable, iterator, query, query, query, query, queryContained, queryContained, queryContained, queryOverlapping, queryOverlapping, queryOverlapping, queryStartMethods inherited from interface Iterable
forEach, spliterator