Package htsjdk.samtools.cram.compression.fqzcomp
package htsjdk.samtools.cram.compression.fqzcomp
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ClassesClassDescriptionDecoder for the CRAM 3.1 FQZComp codec, used for compressing quality scores.Encoder for the CRAM 3.1 FQZComp quality score compression codec.External compressor wrapper for the FQZComp quality score codec.Global flags byte for the FQZComp codec, read from the first byte after the version number in the FQZComp parameter header.Adaptive arithmetic coding models used by FQZComp for encoding and decoding quality scores.A single parameter block for the FQZComp quality score codec.Global parameters for the FQZComp quality score codec.Mutable state tracked during FQZComp encoding and decoding.Utility methods for FQZComp table serialization.