Class CRAMRecordReadFeatures.DecodeResult

java.lang.Object
htsjdk.samtools.cram.structure.CRAMRecordReadFeatures.DecodeResult
Enclosing class:
CRAMRecordReadFeatures
public static final class CRAMRecordReadFeatures.DecodeResult extends Object
Result of the fused single-pass decode: read bases, CIGAR, and optionally MD string + NM count.

  • Field Details

    • readBases

      public final byte[] readBases

    • cigar

      public final Cigar cigar

    • mdString

      public final String mdString

    • nmCount

      public final int nmCount