BEDFeature (htsjdk 5.0.0 API)

All Superinterfaces:: Feature, Locatable, NamedFeature

All Known Implementing Classes:: FullBEDFeature, SimpleBEDFeature

public interface BEDFeature extends NamedFeature

Method Summary

Modifier and Type

Method

Description

Color

getColor()

String

getDescription()

List<FullBEDFeature.Exon>

getExons()

String

getLink()

float

getScore()

Strand

getStrand()

String

getType()

Methods inherited from interface Feature
getChr

Methods inherited from interface Locatable
contains, contigsMatch, getContig, getEnd, getLengthOnReference, getStart, overlaps, withinDistanceOf

Methods inherited from interface NamedFeature
getName

Method Details
- getStrand
  
  Strand getStrand()
- getType
  
  String getType()
- getColor
  
  Color getColor()
- getDescription
  
  String getDescription()
- getExons
  
  List<FullBEDFeature.Exon> getExons()
- getScore
  
  float getScore()
- getLink
  
  String getLink()